CDS

Accession Number TCMCG016C13884
gbkey CDS
Protein Id OMO77827.1
Location join(27674..28330,29951..30205)
Organism Corchorus capsularis
locus_tag CCACVL1_14788

Protein

Length 303aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010688.1
Definition Nuclear pore localization protein NPL4 [Corchorus capsularis]
Locus_tag CCACVL1_14788

EGGNOG-MAPPER Annotation

COG_category UY
Description npl4-like protein
KEGG_TC -
KEGG_Module M00400        [VIEW IN KEGG]
M00403        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
KEGG_ko ko:K14015        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04141        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031625        [VIEW IN EMBL-EBI]
GO:0032182        [VIEW IN EMBL-EBI]
GO:0043130        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044389        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACGACCTCATCGCTAAACAAACCAGGATCACTCGCCAGGAATCTCCTCACTGCGACTCTGTTTCCTTTGACCGGGATTCTGCTAATGCTTTCCAACTGTATGTGAACGAGACACTGGCGTTTGCTTCCAAACGCGGTGGGTTTATGTACGGAACGGTTTCTGAAGAAGGTAGAGTGGAAGTCGATTTCATTTATGAGCCACCTCAACAAGGATTGGAAGAAGATTTGATCCTTTTAAGGGATCCGGAAGAAGAGAAATTGGTTGATGCCATTGCGGCTGGGTTAGGTAGGAGAAGAGTAGGTTTTATTTTTACTCAGACGGTAATGCAAGACAAAAAAGACTACCATTTTACGAACAAGGAGATTCTACAGGCGGCTGAGCTTCACGCAGAGAGTGAGCTGAAGGAGTGGGTTACGGTTGTGGTGAAGCTGGAAGTCAATGAAGATGGGGCTGCGGATGTGCATTTTGAGGCTTTTCAGATGAGTGATATGTGTGTTAAGTTGTTCAAGGAAGAGTGGTTTGTTACTGAGTTTGGAGAAAATGATGATCCAAAGCTTTCCAAGATGAAGAAAGATGTTGTGGTTGGTGGGAAGGATGTTAAGGAGGTTGACAATGATTTCTTCTTGGTCGTTGTTAAGATCTTTGACCATCAGGGTCCTCTTTCCTTGGGCTTTCCCATTGAGAATCGAAACACCCATGCGACACTAAGGTCACTGAAGAATCATTTAGATAGAGCCAAGAATCTTCCATTTGTGAAGAGGATTTCTGATTTCCATTTGCTTCTGTTTCTGGCAAAGTCTCTAGGCCTCAGTTCCGACGTTCCTGCTCTGGCAGAGTGTGTACTAACACAGTCACCCGTGCCAGAAGGTTATCAGCTCCTAATCGAGTCCATGGCCAATACATCTTGA
Protein:  
MDDLIAKQTRITRQESPHCDSVSFDRDSANAFQLYVNETLAFASKRGGFMYGTVSEEGRVEVDFIYEPPQQGLEEDLILLRDPEEEKLVDAIAAGLGRRRVGFIFTQTVMQDKKDYHFTNKEILQAAELHAESELKEWVTVVVKLEVNEDGAADVHFEAFQMSDMCVKLFKEEWFVTEFGENDDPKLSKMKKDVVVGGKDVKEVDNDFFLVVVKIFDHQGPLSLGFPIENRNTHATLRSLKNHLDRAKNLPFVKRISDFHLLLFLAKSLGLSSDVPALAECVLTQSPVPEGYQLLIESMANTS